Strain |
Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest |
Locus Tag |
BURCENK562V_RS22190
|
NCBI Old Locus Tag | BURCENK562V_C1270 |
Name |
arnA1
|
Replicon | ctg7180000002937 |
Genomic location | 431055 - 432002 (- strand) |
Comment | In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2 and BURCENK562V_RS22180 ortholog BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors. |
RefSeq | WP_006482868.1 |
GI | 493528851 |
EC Number | 2.1.2.- |
GI | 493528851 |
NCBI Locus Tag | BURCENK562V_RS22190 |
NCBI Old Locus Tag | BURCENK562V_C1270 |
RefSeq | WP_006482868.1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
formyl transferase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.42 |
Kyte-Doolittle Hydrophobicity Value | 0.030 |
Molecular Weight (kDa) | 33543.7 |
Isoelectric Point (pI) | 6.59 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Burkholderia Ortholog Group |
BG001695 (651 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BURCENK562V_RS22190
Search term: arnA1
Search term: formyl transferase
|
PubMed ID: 22742453
|
Structure and function of both domains of ArnA, a dual function decarboxylase and a formyltransferase, involved in 4-amino-4-deoxy-L-arabinose biosynthesis.
Williams GJ, Breazeale SD, Raetz CR, Naismith JH
J Biol Chem 2005 Jun 17;280(24):23000-8
PubMed ID: 15809294
|
A putative gene cluster for aminoarabinose biosynthesis is essential for Burkholderia cenocepacia viability.
Ortega XP, Cardona ST, Brown AR, Loutet SA, Flannagan RS, Campopiano DJ, Govan JR, Valvano MA
J Bacteriol 2007 May;189(9):3639-44
PubMed ID: 17337576
|
Candidate Essential Genes in Burkholderia cenocepacia J2315 Identified by Genome-Wide TraDIS.
Wong YC, Abd El Ghany M, Naeem R, Lee KW, Tan YC, Pain A, Nathan S
Front Microbiol 2016;7:1288
PubMed ID: 27597847
|