Strain |
Burkholderia cenocepacia H111
GCF_000236215.2|latest |
Locus Tag |
I35_RS01750
|
NCBI Old Locus Tag | I35_0338%2CI35_0379 |
Name |
tssH
Synonym: clpV |
Replicon | chromosome 1 |
Genomic location | 358042 - 360711 (+ strand) |
Comment | Part of the T6SS gene cluster |
RefSeq | WP_006494419.1 |
GI | 493540543 |
NCBI Locus Tag | I35_RS01750 |
NCBI Old Locus Tag | I35_0338%2CI35_0379 |
RefSeq | WP_006494419.1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion system protein TssH
|
Synonyms |
ATPase |
Evidence for Translation | |
Charge (pH 7) | -25.53 |
Kyte-Doolittle Hydrophobicity Value | -0.166 |
Molecular Weight (kDa) | 96659.1 |
Isoelectric Point (pI) | 5.16 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Results | Analysis not done |
Burkholderia Ortholog Group |
BG000372 (654 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: I35_RS01750
Search term: tssH
Search term: type VI secretion system protein TssH
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.9e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.9e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.9e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.9e-40
Percent Identity:
33.8
|
Ensembl
97, assembly
GRCh38.p12
|
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.9e-40
Percent Identity:
33.8
|
A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
|
Remodelling of VipA/VipB tubules by ClpV-mediated threading is crucial for type VI protein secretion.
Bönemann G, Pietrosiuk A, Diemand A, Zentgraf H, Mogk A
EMBO J 2009 Feb 18;28(4):315-25
PubMed ID: 19131969
|
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149
|