Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL1931
|
NCBI Locus Tag | QU43_RS46200 |
Name |
arnB
|
Replicon | chromosome 1 |
Genomic location | 2130635 - 2131786 (+ strand) |
Comment | In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors. |
RefSeq | WP_006482866.1 |
GI | 206560295 |
Entrez | 6932121 |
GI | 206560295 |
INSDC | CAR52232.1 |
NCBI Locus Tag | QU43_RS46200 |
NCBI Old Locus Tag | BCAL1931 |
RefSeq | WP_006482866.1,GeneID |
UniParc | UPI00017B9220 |
UniProtKB Acc | B4EB17 |
UniProtKB ID | B4EB17_BURCJ |
UniRef100 | UniRef100_A0A0D1D6F0 |
UniRef50 | UniRef50_B1XTN6 |
UniRef90 | UniRef90_A0A063BGV1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferas
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.22 |
Kyte-Doolittle Hydrophobicity Value | -0.027 |
Molecular Weight (kDa) | 41849.5 |
Isoelectric Point (pI) | 6.52 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4LC3 | TRANSFERASE | 06/21/13 | X-ray crystal structure of a putative UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase from Burkholderia cenocepacia | BURKHOLDERIA CENOCEPACIA | 1.6 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 539 genera
|
Burkholderia Ortholog Group |
BG001693 (653 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL1931
Search term: arnB
|
A putative gene cluster for aminoarabinose biosynthesis is essential for Burkholderia cenocepacia viability.
Ortega XP, Cardona ST, Brown AR, Loutet SA, Flannagan RS, Campopiano DJ, Govan JR, Valvano MA
J Bacteriol 2007 May;189(9):3639-44
PubMed ID: 17337576
|
PubMed ID: 22742453
|
Candidate Essential Genes in Burkholderia cenocepacia J2315 Identified by Genome-Wide TraDIS.
Wong YC, Abd El Ghany M, Naeem R, Lee KW, Tan YC, Pain A, Nathan S
Front Microbiol 2016;7:1288
PubMed ID: 27597847
|