Apr 30, 2018 |
BCAM0334
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10229_2085
|
Burkholderia mallei
NCTC 10229 |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2158
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1496
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2078
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P10441.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0865
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19948863. New comment: Removed gene name bceL because it was incorrectly assigned in a previous study. Analysis of other Burkholderia genomes including B. phytofirmans and B. xenovorans indicated that the protein was absent from the bce cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0515
|
Burkholderia pseudomallei
K96243 |
New gene name: tssI-6. New product name: type VI secretion system protein TssI-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0335
|
Burkholderia cenocepacia
J2315 |
New gene name: virD4. New product name: pseudogene (virD4). New PubMed ID: 18931103. New comment: The virD4 homologue (BCAM0335) contains a frameshift mutation (PMID:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1518.1
|
|
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2159
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1497
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2154
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxH. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P43341.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1003
|
Burkholderia cenocepacia
J2315 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0516
|
Burkholderia pseudomallei
K96243 |
New gene name: tssH-6. New product name: type VI secretion system protein TssH-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19230
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB2. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BTH_II0843
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2168
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1498
|
Burkholderia pseudomallei
K96243 |
New gene name: tssD-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2759
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxK. New product name: LpxK. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P27300.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS06470
|
Burkholderia dolosa
AU0158 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0517
|
Burkholderia pseudomallei
K96243 |
New gene name: tssG-6. New product name: type VI secretion system protein TssG-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19235
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB3. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1530
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2169
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1499
|
Burkholderia pseudomallei
K96243 |
New gene name: tssE-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0508
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxL. New product name: lipid A biosynthesis myristoyl acyltransferase LpxL. New product name confidence: Class 1. New PubMed ID: 28085228. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1689
|
Burkholderia pseudomallei
K96243 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0518
|
Burkholderia pseudomallei
K96243 |
New gene name: tssF-6. New product name: type VI secretion system protein TssF-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19240
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB4. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS668_A2160
|
Burkholderia pseudomallei
668 |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2192
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1500
|
Burkholderia pseudomallei
K96243 |
New gene name: tssF-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0788
|
Burkholderia cenocepacia
J2315 |
New gene name: pagL. New product name: Lipid A deacylase PagL. New product name confidence: Class 1. New PubMed ID: 28085228. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II0689
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0519
|
Burkholderia pseudomallei
K96243 |
New gene name: tssE-6. New product name: type VI secretion system protein TssE-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19245
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB6. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1710b_A056
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2197
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1501
|
Burkholderia pseudomallei
K96243 |
New gene name: tssG-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2408
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 28085228. New PubMed ID: 8809774. Annotation transferred from: UniProtKB:P60752.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
bglu_1g06560
|
Burkholderia glumae
BGR1 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0520
|
Burkholderia pseudomallei
K96243 |
New gene name: tssD-6. New product name: type VI secretion system protein TssD-6. New gene name synonym: hcp3. New product name synonym: hemolysin-coregulated protein Hcp3. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19250
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB5. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2203
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1502
|
Burkholderia pseudomallei
K96243 |
New gene name: tssH-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS21445
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: lpxA. New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A722.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_4613
|
Burkholderia multivorans
ATCC 17616 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0521
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-6. New product name: type VI secretion system protein TssC-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19255
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB8. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0755
|
Burkholderia mallei
NCTC 10247 |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2204
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1503
|
Burkholderia pseudomallei
K96243 |
New gene name: tssI-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS00665
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: lpxC. New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A725.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS16930
|
Burkholderia ambifaria
AMMD |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0522
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-6. New product name: type VI secretion system protein TssB-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19260
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB9. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10229_2075
|
Burkholderia mallei
NCTC 10229 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2235
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1504
|
Burkholderia pseudomallei
K96243 |
New gene name: tagAB-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS21435
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: lpxD. New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P21645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS21090
|
Burkholderia cenocepacia
H111 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0523
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-6. New product name: type VI secretion system protein TssA-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS19265
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB10. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1529
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL2239
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1505
|
Burkholderia pseudomallei
K96243 |
New gene name: tagB-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS21450
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: lpxB. New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P10441.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS08345
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0524
|
Burkholderia pseudomallei
K96243 |
New gene name: tagE-6. New product name: type VI secretion system-associated protein TagE-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS19270
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB11. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BTH_II0848
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bopE. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSL2245
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSS1506
|
Burkholderia pseudomallei
K96243 |
New gene name: tagC-5. New product name confidence: Class 2. New PubMed ID: 17660433.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BCEP18194_RS17050
|
Burkholderia lata
383 |
New gene name: lpxH. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P43341.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BCEP18194_RS33325
|
Burkholderia lata
383 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BPSS0525
|
Burkholderia pseudomallei
K96243 |
New gene name: tagF-6. New product name: type VI secretion system-associated protein TagF-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS19275
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virD4. New product name: type IV secretion system-coupling protein VirD4. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSS1525
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 12897019 .New PubMed ID: 20951592. New PubMed ID: 12897019.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSL2250
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSS1507
|
Burkholderia pseudomallei
K96243 |
New gene name: tagD-5. New product name confidence: Class 2. New PubMed ID: 17660433.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS01875
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: lpxK. New product name: LpxK. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P27300.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BCAM1004
|
Burkholderia cenocepacia
J2315 |
New gene name: bceN. New product name: GDP-D-mannose 4,6-dehydratase BceN. New product name confidence: Class 1. New PubMed ID: 23460819. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BPSS0526
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-6. New product name: type VI secretion system protein TssM-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS34640
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwG. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BURPS668_A2155
|
Burkholderia pseudomallei
668 |
New gene name: bopE. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSL2251
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSS1508
|
Burkholderia pseudomallei
K96243 |
New gene name: tssJ-5. New product name confidence: Class 2. New PubMed ID: 17660433.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS04580
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: lpxL. New product name: lipid A biosynthesis myristoyl acyltransferase LpxL. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: BGD:BCAL0508.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
AK34_RS06465
|
Burkholderia dolosa
AU0158 |
New gene name: bceN. New product name: GDP-D-mannose 4,6-dehydratase BceN. New product name confidence: Class 2. New PubMed ID: 23460819. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:BCAM1004.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BPSS0527
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-6. New product name: type VI secretion system protein TssL-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS34645
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwH. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BURPS1710b_A056
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSL2257
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BPSS1509
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-5. New product name confidence: Class 2. New PubMed ID: 17660433.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS03200
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: pagL. New product name: Lipid A deacylase PagL. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: BGD:BCAL0788.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BPSS1688
|
Burkholderia pseudomallei
K96243 |
New gene name: bceN. New product name: GDP-D-mannose 4,6-dehydratase BceN. New product name confidence: Class 2. New PubMed ID: 23460819. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:BCAM1004.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BPSS0528
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-6. New product name: type VI secretion system protein TssK-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS34665
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwF. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bopE. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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