Jan 25, 2011 |
BTH_I2961
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssE-1. New gene name: tssE-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0137
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssE-2. New gene name: tssE-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1898
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssE-4. New gene name: tssE-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0867
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssE-5. New gene name: tssE-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2960
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssF-1. New gene name: tssF-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0136
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssF-2. New gene name: tssF-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1897
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssF-4. New gene name: tssF-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0866
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssF-5. New gene name: tssF-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2959
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssG-1. New gene name: tssG-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0135
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssG-2. New gene name: tssG-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1896
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssG-4. New gene name: tssG-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0865
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssG-5. New gene name: tssG-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2966
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssJ-1. New gene name: tssJ-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0124
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssJ-2. New gene name: tssJ-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1888
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssJ-4. New gene name: tssJ-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0858
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssJ-5. New gene name: tssJ-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2967
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssK-1. New gene name: tssK-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0125
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssK-2. New gene name: tssK-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1887
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssK-4. New gene name: tssK-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0857
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Tssk-5. New gene name: tssk-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2968
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssL-1. New gene name: tssL-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0119
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssL-2a. New gene name: tssL-2a. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0126
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssL-2b. New gene name: tssL-2b. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1886
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssL-4. New gene name: tssL-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0856
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssL-5. New gene name: tssL-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2954
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssM-1. New gene name: tssM-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0127
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssM-2. New gene name: tssM-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1885
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssM-4. New gene name: tssM-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0855
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssM-5. New gene name: tssM-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0129
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: VgrG-2. New gene name: vgrG-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1894
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: VgrG-4a. New gene name: vgrG-4a. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1893
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: VgrG-4b. New gene name: vgrG-4b. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 20, 2020 |
WQ49_RS20305
|
Burkholderia cenocepacia
K56-2 |
New product name: vitronectin-binding trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: A BCAM0223::Tp mutant was deficient in hemagglutination, affected in adherence to vitronectin and in biofilm formation and showed attenuated virulence in the Galleria mellonella model of infection. . New PMIDs: 22919579, 22848588, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2405
|
Burkholderia cenocepacia
J2315 |
New product name: waaL. New gene name: waaL. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2402
|
Burkholderia cenocepacia
J2315 |
New product name: WabO. New gene name: wabO. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2403
|
Burkholderia cenocepacia
J2315 |
New product name: WabP. New gene name: wabP. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2404
|
Burkholderia cenocepacia
J2315 |
New product name: wabQ. New gene name: wabQ. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2406
|
Burkholderia cenocepacia
J2315 |
New product name: wabR. New gene name: wabR. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2407
|
Burkholderia cenocepacia
J2315 |
New product name: WabS. New gene name: wabS. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2058
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2059
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 16988222.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1871
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22624054.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0379
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22830644.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0219
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0218
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0227
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0221
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0222
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0228
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAL2945
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 23256532.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAS0409
|
Burkholderia cenocepacia
J2315 |
New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New GO Accession: GO:0008237(IMP). New GO Accession: GO:0015628(IMP). New PubMed reference: 22848580. New PubMed reference: 12904566. New PubMed reference: 2645209.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM2549
|
Burkholderia cenocepacia
J2315 |
New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New PubMed reference: 8834871.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Aug 1, 2008 |
Bcep18194_A4778
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 94% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1529
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 96% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1632
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 98% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1152
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 98% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Apr 30, 2018 |
BTH_RS10711
|
Burkholderia thailandensis
E264 ATCC 700388 |
New CDS gene identified at 2571843..2572394 (+ strand). New start coordinate: 2571843. New end coordinate: 2572394. New gene name: malH. New product name: MalH. New PubMed ID: 22765305. New comment: Part of the malleilactone biosynthetic gene cluster..
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS1546
|
Burkholderia pseudomallei
K96243 |
New end coordinate: 2101323. New product name: regulator of type III secretion system effector proteins BsaN (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 25085508. New PubMed ID: 20345664. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. The original start codon (GTG) was replaced with an ATG that was 117 bp upstream of it (PMID:25085508).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0729
|
|
New end coordinate: 738159. New gene name: tssM. New product name confidence: Class 1. New PubMed ID: 19168747. New comment: New translation start site at 738159 bp was confirmed by immunoblot analysis and complementation studies (PMID: 19168747 ). New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3517
|
|
New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2058
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2059
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3126b
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 15687196.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0352
|
Burkholderia cenocepacia
J2315 |
New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01775
|
Burkholderia cenocepacia
H111 |
New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS28290
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL0340
|
Burkholderia cenocepacia
J2315 |
New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
I35_RS01715
|
Burkholderia cenocepacia
H111 |
New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS28230
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1532
|
Burkholderia pseudomallei
K96243 |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1710b_A057
|
Burkholderia pseudomallei
1710b |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0753
|
Burkholderia mallei
NCTC 10247 |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10229_2073
|
Burkholderia mallei
NCTC 10229 |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1531
|
|
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1529
|
Burkholderia pseudomallei
K96243 |
New gene name synonym: ipaD. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 20823511. New PubMed ID: 12410823. Annotation transferred from: UniProtKB:P18013.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2630
|
Burkholderia cenocepacia
J2315 |
New gene name synonym: phuV. New product name confidence: Class 2. New PubMed ID: 17187664.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0581
|
Burkholderia cenocepacia
J2315 |
New gene name synonym: rpfF. New PubMed ID: 18049456. New PubMed ID: 23231487. New PubMed ID: 25681189. New PubMed ID: 26725701. New PubMed ID: 22221091. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Sep 15, 2008 |
Bamb_6150
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 86% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
|
Sep 15, 2008 |
Bcep18194_C7411
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 89% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
|
Sep 15, 2008 |
Bcen_5637
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
Sep 15, 2008 |
Bcen_5637
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
Sep 15, 2008 |
Bcen2424_6002
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
|
Sep 15, 2008 |
Bcenmc03_6493
|
Burkholderia cenocepacia
MC0-3 |
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
|
Jan 14, 2010 |
BCAS0223
|
Burkholderia cenocepacia
J2315 |
New gene name: afcC. New product name: AfcC. New product name confidence: Class 2. New evidence reference (PMID): 9758823.
|
Eoin O'Grady, Department of Microbiology and Infectious Diseases, University of Calgary, Canada
|
Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 1. New PubMed ID: 15557647.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Aug 25, 2008 |
Bcenmc03_6383
|
Burkholderia cenocepacia
MC0-3 |
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
Aug 25, 2008 |
Bcen2424_5874
|
|
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
Aug 25, 2008 |
Bcen_5510
|
|
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
Aug 25, 2008 |
Bcep18194_C7212
|
|
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
Aug 25, 2008 |
Bamb_0841
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 86% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Aug 25, 2008 |
Bcen2424_0980
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Aug 25, 2008 |
Bcen_0501
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|