Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL0345
|
NCBI Locus Tag | QU43_RS38260 |
Name |
tssF
Synonym: bcsH |
Replicon | chromosome 1 |
Genomic location | 370125 - 371960 (+ strand) |
Comment | Part of the T6SS gene cluster |
RefSeq | WP_006484396.1 |
GI | 206558751 |
Entrez | 6930890 |
GI | 206558751 |
INSDC | CAR50655.1 |
NCBI Locus Tag | QU43_RS38260 |
NCBI Old Locus Tag | BCAL0345 |
RefSeq | WP_006484396.1,GeneID |
UniParc | UPI00017B9100 |
UniProtKB Acc | B4E6R7 |
UniProtKB ID | B4E6R7_BURCJ |
UniRef100 | UniRef100_A0A0D1C278 |
UniRef50 | UniRef50_C4AZ32 |
UniRef90 | UniRef90_J4RM29 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion system protein TssF
|
Synonyms |
putative type VI secretion system protein TssF |
Evidence for Translation | |
Charge (pH 7) | -0.16 |
Kyte-Doolittle Hydrophobicity Value | -0.081 |
Molecular Weight (kDa) | 68840.0 |
Isoelectric Point (pI) | 6.98 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 106 genera
|
Burkholderia Ortholog Group |
BG000370 (654 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL0345
Search term: tssF
Search term: type VI secretion system protein TssF
|
A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
|
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149
|